Welcome to einops-land! | What's in this vignette? | Load a batch of images to play with | Composition of axes | Decomposition of axis | Order of axes matters | Meet einops.reduce | Stack and concatenate | Addition or removal of axes | Repeating elements | Reduce ⇆ repeat | Fancy examples in random order | Summary | Bonus

Introduction | Overview | Managing APackOfTheClones run data | Important Note | Utilities for Managing APackOfTheClones Runs | APOTCPlot | AdjustAPOTC | Tip to Speeding up Adjustments | Usage Examples | Renaming Cluster Labels | Extra Cluster Repulsion

Introduction | Setting up the Seurat Object and Receptor Library with scRepertoire | Simple ball packing visualization | Key characteristics of the plot | Working with different reduction bases and clonal representations | Working With a Data Subset | A Note on Subsetting Data | Customization of Visual Parameters | Visually Scaling Circle Sizes | Cluster Repulsion | Managing the Clone Size Legend | Other Modifications | Conclusion

Introduction | Seperately Modifying the Clone Size Legend | Getting Clone Sizes as a List | Getting Clonotypes Common Across Seurat Clusters | Getting Geometric Centroids For Seurat Reductions | Highlighting Specific Clonotypes

Dependencies | Installation of Latest CRAN release | Installation of Development Editions | Installation of legacy versions

Introduction | Getting Clonotypes Common Across Seurat Clusters | Visualizing Shared Clonotypes on an APackOfTheClones Plot | Synergy with showCloneHighlight()

Installation of Development Editions